C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial fission regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130645 Mtfr1-001 ENSMUSG00000027601 10090 + 3:19188110-19220817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000130645
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000130645 5.648±1.52 12.937±1.61 5.673±0.96 5.374±3.71 5.503±0.99 8.254±1.34 7.818±2.32 11.969±4.21 17.171±10.92 8.472±0.30 3.629±1.10 9.639±3.90 6.118±4.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LS CIL_0005LS_0003 CGP 3:19132146-19220817
CIL_0005LR CIL_0005LR_0003 CGP 3:19187327-19311322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000266 ISS mitochondrial fission
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0007005 ISS mitochondrion organization
GO:0009060 IMP aerobic respiration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262146 MTFR1-003 protein_coding Homo_sapiens 0 992
ENST00000424808 MTFR1-005 retained_intron Homo_sapiens 0 861
ENST00000517944 MTFR1-009 processed_transcript Homo_sapiens 0 708
ENST00000518636 MTFR1-013 processed_transcript Homo_sapiens 3e-31 139
ENST00000522239 MTFR1-010 processed_transcript Homo_sapiens 0 361
ENST00000523170 MTFR1-008 processed_transcript Homo_sapiens 9e-31 137
ENST00000523222 MTFR1-012 nonsense_mediated_decay Homo_sapiens 0 257

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