C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: expressed sequence AU019823
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131351 AU019823-001 ENSMUSG00000059820 10090 - 9:50605240-50617464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000131351
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000131351 1.348±0.00 5.253±0.26 5.022±1.81 2.815±0.39 1.913±0.42 3.009±0.00 3.636±1.15 4.619±0.17 2.305±0.16 4.477±1.59 5.187±1.50 1.647±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RG CIL_0000RG_0002 CGP 9:50596338-50605320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280352 C11orf57-001 protein_coding Homo_sapiens 0 904
ENST00000393047 C11orf57-002 protein_coding Homo_sapiens 0 922
ENST00000420986 C11orf57-005 protein_coding Homo_sapiens 0 952
ENST00000524989 C11orf57-006 nonsense_mediated_decay Homo_sapiens 0 845
ENST00000525785 C11orf57-007 protein_coding Homo_sapiens 0 706
ENST00000526879 C11orf57-009 protein_coding Homo_sapiens 0 331
ENST00000530104 C11orf57-004 retained_intron Homo_sapiens 0 424
ENST00000531378 C11orf57-008 protein_coding Homo_sapiens 0 377
ENST00000532163 C11orf57-003 protein_coding Homo_sapiens 0 817

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