C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 63c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131878 Tmem63c-002 ENSMUSG00000034145 10090 + 12:87038439-87090041 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000131878
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000131878 0.037±0.02 1.846±0.66 0.051±0.04 0.186±0.02 0.047±0.00 0.025±0.00 0.007±0.00 0.077±0.00 0.021±0.01 0.262±0.10 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0002 VISTA 12:86500572-87103602
CIL_0008WP CIL_0008WP_0002 VISTA 12:86510598-87113301
CIL_000867 CIL_000867_0002 VISTA 12:86515545-87117582
CIL_0007VT CIL_0007VT_0002 VISTA 12:86594665-87199694
CIL_0004XG CIL_0004XG_0002 CGP 12:86983381-87090043
CIL_0006B7 CIL_0006B7_0002 CGP 12:87021340-87102539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298351 TMEM63C-001 protein_coding Homo_sapiens 0 2324
ENST00000554766 TMEM63C-005 protein_coding Homo_sapiens 0 468
ENST00000557752 RP11-463C8.4-001 nonsense_mediated_decay Homo_sapiens 0 324

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