C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2810021J22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132570 2810021J22Rik-002 ENSMUSG00000020491 10090 + 11:58867267-58878004 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryTestisENSMUST00000132570
Transcript ID Brain Colon Heart Liver Lung Ovary Testis
ENSMUST00000132570 4.790±0.00 1.402±0.00 1.521±0.00 0.966±0.17 2.084±0.00 3.976±0.06 4.958±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343459 ZNF34-006 protein_coding Homo_sapiens 0.000003 58
ENST00000429371 ZNF34-002 protein_coding Homo_sapiens 0.000003 58
ENST00000468296 ZNF717-006 protein_coding Homo_sapiens 5e-34 148
ENST00000471541 ZNF717-003 protein_coding Homo_sapiens 2e-33 147
ENST00000477374 ZNF717-005 protein_coding Homo_sapiens 9e-34 148
ENST00000478296 ZNF717-002 protein_coding Homo_sapiens 1e-32 147
ENST00000491507 ZNF717-004 processed_transcript Homo_sapiens 7e-33 147
ENST00000527740 ZNF34-004 retained_intron Homo_sapiens 0.000003 58
ENST00000534337 ZNF34-007 protein_coding Homo_sapiens 0.000001 58
ENST00000534445 ZNF34-003 protein_coding Homo_sapiens 0.0000008 58

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