C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear autoantigenic sperm protein (histone-binding)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134038 Nasp-004 ENSMUSG00000028693 10090 - 4:116616984-116623922 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLiverLungOvaryENSMUST00000134038
Transcript ID Adipose Breast Liver Lung Ovary
ENSMUST00000134038 0.153±0.00 0.385±0.00 0.242±0.00 0.303±0.00 0.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PU CIL_0001PU_0002 CGP 4:116596654-116627941
CIL_0001PT CIL_0001PT_0002 CGP 4:116601052-116651680

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350030 NASP-001 protein_coding Homo_sapiens 0 244
ENST00000351223 NASP-005 protein_coding Homo_sapiens 0 244
ENST00000372052 NASP-004 protein_coding Homo_sapiens 0 244
ENST00000437362 NASP-006 nonsense_mediated_decay Homo_sapiens 1.00053e-42 178
ENST00000437901 NASP-007 protein_coding Homo_sapiens 0 244
ENST00000453748 NASP-002 nonsense_mediated_decay Homo_sapiens 1.99965e-42 178
ENST00000464190 NASP-008 retained_intron Homo_sapiens 0 244
ENST00000525515 NASP-015 protein_coding Homo_sapiens 5.99756e-43 178
ENST00000528084 NASP-012 nonsense_mediated_decay Homo_sapiens 4.06377e-44 182
ENST00000529333 NASP-023 nonsense_mediated_decay Homo_sapiens 8.00141e-43 178
ENST00000530840 NASP-014 nonsense_mediated_decay Homo_sapiens 4e-24 115
ENST00000531532 NASP-013 nonsense_mediated_decay Homo_sapiens 5.00264e-43 178
ENST00000534101 NASP-022 processed_transcript Homo_sapiens 0 244

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