C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: JNK1/MAPK8-associated membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134041 Jkamp-005 ENSMUSG00000005078 10090 + 12:72089164-72094867 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryENSMUST00000134041
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary
ENSMUST00000134041 14.806±0.00 40.046±6.37 2.728±0.00 19.514±6.50 12.828±4.20 21.757±4.60 8.989±1.82 13.251±3.20 17.089±4.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AS CIL_0005AS_0002 CGP 12:72073428-72101461
CIL_0004VY CIL_0004VY_0002 CGP 12:72085589-72185029

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261247 JKAMP-001 protein_coding Homo_sapiens 0 717
ENST00000356057 JKAMP-201 protein_coding Homo_sapiens 0 682
ENST00000425728 JKAMP-002 protein_coding Homo_sapiens 0 684
ENST00000553941 JKAMP-007 retained_intron Homo_sapiens 0 776
ENST00000554271 JKAMP-003 protein_coding Homo_sapiens 0 715
ENST00000554721 JKAMP-006 retained_intron Homo_sapiens 0 569
ENST00000554754 JKAMP-010 processed_transcript Homo_sapiens 0 473
ENST00000554795 JKAMP-004 protein_coding Homo_sapiens 0 682
ENST00000555491 JKAMP-011 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000556985 JKAMP-013 protein_coding Homo_sapiens 0 580
ENST00000557560 JKAMP-009 processed_transcript Homo_sapiens 0 473
ENST00000602482 JKAMP-014 retained_intron Homo_sapiens 0 774
ENST00000616435 JKAMP-202 protein_coding Homo_sapiens 0 717

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