C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase C, eta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135665 Plch2-002 ENSMUSG00000029055 10090 - 4:154983662-155043154 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000135665
Transcript ID Adipose Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000135665 0.178±0.00 3.180±1.15 1.517±0.16 5.469±0.83 0.030±0.00 1.284±0.21 2.725±1.11 0.220±0.00 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004629 IDA phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0016042 IEA lipid catabolic process
GO:0035556 IEA intracellular signal transduction
GO:0046488 IDA phosphatidylinositol metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278878 PLCH2-002 protein_coding Homo_sapiens 0 1929
ENST00000343889 PLCH2-001 retained_intron Homo_sapiens 0 3085
ENST00000378486 PLCH2-201 protein_coding Homo_sapiens 0 3343
ENST00000419816 PLCH2-009 protein_coding Homo_sapiens 0 3338
ENST00000449969 PLCH2-008 protein_coding Homo_sapiens 0 3271
ENST00000462379 PLCH2-006 retained_intron Homo_sapiens 0 676
ENST00000473964 PLCH2-005 retained_intron Homo_sapiens 0 547
ENST00000609981 PLCH2-010 protein_coding Homo_sapiens 0 281
ENST00000620687 PLCH2-202 protein_coding Homo_sapiens 0 3343

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