C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell activation inhibitor, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136274 Tcaim-003 ENSMUSG00000046603 10090 + 9:122805596-122836327 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000136274
Transcript ID Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000136274 1.284±0.66 1.043±0.02 0.826±0.19 0.493±0.17 0.863±0.72 0.570±0.23 1.105±0.00 1.430±0.55 0.858±0.47 0.805±0.20 0.109±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JG CIL_0005JG_0002 CGP 9:122747346-122836334
CIL_0005JI CIL_0005JI_0002 CGP 9:122805539-122862128

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342649 TCAIM-001 protein_coding Homo_sapiens 0 968
ENST00000412611 TCAIM-007 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000417237 TCAIM-005 protein_coding Homo_sapiens 0 939
ENST00000417768 TCAIM-014 nonsense_mediated_decay Homo_sapiens 0 869
ENST00000431657 TCAIM-008 nonsense_mediated_decay Homo_sapiens 0 348

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