C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyruvate dehydrogenase phosphatase regulatory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144377 Pdpr-002 ENSMUSG00000033624 10090 + 8:111094655-111135147 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000144377
Transcript ID Ovary
ENSMUST00000144377 2.959±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004047 IEA aminomethyltransferase activity
GO:0005739 IDA mitochondrion
GO:0006546 IEA glycine catabolic process
GO:0016491 IEA oxidoreductase activity
GO:0032259 IEA methylation
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288050 PDPR-001 protein_coding Homo_sapiens 0 2442
ENST00000398122 PDPR-003 protein_coding Homo_sapiens 0 2211
ENST00000429810 RP11-252A24.2-003 retained_intron Homo_sapiens 0 824
ENST00000561920 PDPR-002 retained_intron Homo_sapiens 0 1413
ENST00000562100 PDPR-006 processed_transcript Homo_sapiens 0 1413
ENST00000563377 RP11-252A24.2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 2351
ENST00000563930 PDPR-009 protein_coding Homo_sapiens 0 499
ENST00000564563 PDPR-008 nonsense_mediated_decay Homo_sapiens 0 769
ENST00000565186 PDPR-004 nonsense_mediated_decay Homo_sapiens 0 1834
ENST00000565724 RP11-252A24.2-007 retained_intron Homo_sapiens 0 599
ENST00000566802 RP11-252A24.2-002 retained_intron Homo_sapiens 0 1362
ENST00000567046 PDPR-007 protein_coding Homo_sapiens 0 769
ENST00000567896 PDPR-011 protein_coding Homo_sapiens 0 344
ENST00000568530 PDPR-005 protein_coding Homo_sapiens 0 2442
ENST00000569042 PDPR-010 protein_coding Homo_sapiens 0 569

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