C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and BTB domain containing 8 opposite strand
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146767 Zbtb8os-003 ENSMUSG00000057572 10090 + 4:129335695-129354547 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverTestisENSMUST00000146767
Transcript ID Heart Liver Testis
ENSMUST00000146767 1.101±0.00 3.721±0.00 4.211±1.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006388 ISS tRNA splicing, via endonucleolytic cleavage and ligation
GO:0046872 IEA metal ion binding
GO:0072669 ISS tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341885 ZBTB8OS-017 protein_coding Homo_sapiens 1e-31 139
ENST00000373501 ZBTB8OS-007 protein_coding Homo_sapiens 0 385
ENST00000373506 ZBTB8OS-010 protein_coding Homo_sapiens 0 420
ENST00000423890 ZBTB8OSP2-001 processed_pseudogene Homo_sapiens 0 505
ENST00000436661 ZBTB8OS-009 protein_coding Homo_sapiens 0 431
ENST00000465588 ZBTB8OS-005 protein_coding Homo_sapiens 0 385
ENST00000466361 ZBTB8OS-011 retained_intron Homo_sapiens 3e-35 152
ENST00000468695 ZBTB8OS-001 protein_coding Homo_sapiens 0 569
ENST00000473294 ZBTB8OS-006 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000473383 ZBTB8OS-012 retained_intron Homo_sapiens 0 333
ENST00000476493 ZBTB8OS-013 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000479075 ZBTB8OS-003 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000483138 ZBTB8OS-016 processed_transcript Homo_sapiens 0 481
ENST00000492007 ZBTB8OS-004 protein_coding Homo_sapiens 5e-35 152
ENST00000498691 ZBTB8OS-014 nonsense_mediated_decay Homo_sapiens 0 250

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