C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147567 Nagpa-002 ENSMUSG00000023143 10090 - 16:5195289-5204002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147567
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147567 2.846±0.52 4.074±0.71 2.737±0.30 1.710±0.36 2.856±0.13 2.856±0.70 1.083±0.36 1.974±0.51 1.170±0.34 2.180±0.07 0.942±0.20 3.331±1.12 2.401±0.00 1.053±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004S CIL_00004S_0002 CGP 16:5147109-5204012

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312251 NAGPA-001 protein_coding Homo_sapiens 0 1373
ENST00000381955 NAGPA-007 protein_coding Homo_sapiens 0 1057
ENST00000561580 NAGPA-002 retained_intron Homo_sapiens 0 305
ENST00000562037 NAGPA-010 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000562346 NAGPA-019 protein_coding Homo_sapiens 0 518
ENST00000562746 NAGPA-004 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000563578 NAGPA-005 protein_coding Homo_sapiens 0 737
ENST00000564397 NAGPA-006 retained_intron Homo_sapiens 0 392
ENST00000564922 NAGPA-008 processed_transcript Homo_sapiens 0 309
ENST00000565876 NAGPA-011 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000566137 NAGPA-016 retained_intron Homo_sapiens 0 392
ENST00000567739 NAGPA-013 retained_intron Homo_sapiens 0 512
ENST00000568202 NAGPA-003 retained_intron Homo_sapiens 0 573
ENST00000568528 NAGPA-015 processed_transcript Homo_sapiens 2e-33 147
ENST00000569296 NAGPA-012 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000591478 NAGPA-020 processed_transcript Homo_sapiens 0 344

Loading