C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IKAROS family zinc finger 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153650 Ikzf4-005 ENSMUSG00000002578 10090 - 10:128641203-128645807 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079K CIL_00079K_0002 CGP 10:128624530-128645991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0042803 IPI protein homodimerization activity
GO:0043425 IPI bHLH transcription factor binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IPI negative regulation of transcription, DNA-templated
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262032 IKZF4-001 protein_coding Homo_sapiens 0 327
ENST00000431367 IKZF4-201 protein_coding Homo_sapiens 0 327
ENST00000547167 IKZF4-003 protein_coding Homo_sapiens 0 327
ENST00000547668 IKZF4-009 processed_transcript Homo_sapiens 3e-36 156
ENST00000547791 IKZF4-005 protein_coding Homo_sapiens 0 333
ENST00000548601 IKZF4-007 processed_transcript Homo_sapiens 0 329
ENST00000549519 IKZF4-008 processed_transcript Homo_sapiens 0 250
ENST00000550860 IKZF4-006 processed_transcript Homo_sapiens 0 207
ENST00000551103 IKZF4-002 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000551124 IKZF4-004 retained_intron Homo_sapiens 0 375
ENST00000551701 IKZF4-013 processed_transcript Homo_sapiens 0 327

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