C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IKAROS family zinc finger 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002578 Ikzf4 10090 - 10:128630843-128645991 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065334 Ikzf4-002 128632415-128645826 protein_coding
  ENSMUST00000105233 Ikzf4-003 128632469-128645844 nonsense_mediated_decay
  ENSMUST00000119614 Ikzf4-004 128633714-128644648 protein_coding
  ENSMUST00000133342 Ikzf4-001 128630843-128645991 protein_coding
  ENSMUST00000139442 Ikzf4-006 128641177-128645790 nonsense_mediated_decay
  ENSMUST00000149762 Ikzf4-008 128644438-128645826 processed_transcript
  ENSMUST00000153650 Ikzf4-005 128641203-128645807 nonsense_mediated_decay
  ENSMUST00000156052 Ikzf4-007 128640261-128645796 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105233ENSMUST00000119614ENSMUST00000133342ENSMUST00000156052
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105233 0.332±0.15 0.295±0.00 N/A 2.424±1.13 0.714±0.12 0.227±0.09 0.129±0.08 0.384±0.14 0.074±0.05 0.316±0.03 0.102±0.05 0.393±0.12 0.264±0.16 0.482±0.12
ENSMUST00000119614 N/A 0.706±0.00 N/A N/A 0.484±0.06 0.153±0.04 N/A N/A N/A N/A 0.106±0.01 0.608±0.24 N/A N/A
ENSMUST00000133342 0.170±0.00 1.172±0.27 0.247±0.00 6.485±1.22 0.369±0.16 N/A N/A 0.671±0.07 0.283±0.29 0.748±0.32 0.067±0.03 0.657±0.21 0.727±0.59 N/A
ENSMUST00000156052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.776±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079K CIL_00079K_0002 CGP 10:128624530-128645991

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IPI protein homodimerization activity
GO:0043425 IPI bHLH transcription factor binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IPI negative regulation of transcription, DNA-templated
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037068 IKZF4 IKAROS family zinc finger 4 (Eos) protein_coding Danio_rerio
ENSG00000123411 IKZF4 IKAROS family zinc finger 4 (Eos) protein_coding Homo_sapiens

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