C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GTPase activating RANGAP domain-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153717 Garnl3-005 ENSMUSG00000038860 10090 - 2:33004632-33008328 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000153717
Transcript ID Muscle
ENSMUST00000153717 0.061±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373386 GARNL3-001 nonsense_mediated_decay Homo_sapiens 1e-31 143
ENST00000373387 GARNL3-003 protein_coding Homo_sapiens 1e-31 143
ENST00000435213 GARNL3-201 protein_coding Homo_sapiens 1e-31 143
ENST00000460176 GARNL3-022 nonsense_mediated_decay Homo_sapiens 6e-33 145
ENST00000481875 GARNL3-014 retained_intron Homo_sapiens 1e-39 167

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