C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154827 Alg13-002 ENSMUSG00000041718 10090 + X:144318023-144374445 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000154827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154827 0.820±0.37 1.100±0.36 1.047±0.20 1.323±0.11 0.718±0.26 0.840±0.22 0.348±0.12 0.360±0.04 1.334±0.71 0.659±0.23 0.318±0.18 3.035±1.30 2.289±1.25 6.025±2.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004577 IEA N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006508 IEA proteolysis
GO:0008234 IEA cysteine-type peptidase activity
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0030246 IEA carbohydrate binding
GO:0030259 IEA lipid glycosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251943 ALG13-201 protein_coding Homo_sapiens 0 2002
ENST00000371979 ALG13-002 protein_coding Homo_sapiens 0 342
ENST00000394780 ALG13-001 protein_coding Homo_sapiens 0 2026
ENST00000436609 ALG13-023 protein_coding Homo_sapiens 0 1906
ENST00000460092 ALG13-005 processed_transcript Homo_sapiens 1e-34 150
ENST00000468657 ALG13-021 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000470971 ALG13-024 nonsense_mediated_decay Homo_sapiens 0 985
ENST00000471924 ALG13-029 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000473389 ALG13-019 protein_coding Homo_sapiens 0 342
ENST00000482374 ALG13-012 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000482742 ALG13-015 protein_coding Homo_sapiens 0 318
ENST00000486353 ALG13-027 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000486578 ALG13-006 processed_transcript Homo_sapiens 0 407
ENST00000487141 ALG13-020 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000492038 ALG13-016 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000495283 ALG13-013 nonsense_mediated_decay Homo_sapiens 0 1914
ENST00000610588 ALG13-202 protein_coding Homo_sapiens 0 1842
ENST00000621367 ALG13-203 protein_coding Homo_sapiens 0 1914
ENST00000622986 ALG13-026 protein_coding Homo_sapiens 0 344
ENST00000622997 ALG13-025 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000623144 ALG13-014 nonsense_mediated_decay Homo_sapiens 0 2002
ENST00000623148 ALG13-018 nonsense_mediated_decay Homo_sapiens 0 1842
ENST00000623189 ALG13-032 protein_coding Homo_sapiens 0 222
ENST00000623622 ALG13-030 protein_coding Homo_sapiens 0 568
ENST00000624161 ALG13-003 nonsense_mediated_decay Homo_sapiens 0 1906
ENST00000624881 ALG13-011 nonsense_mediated_decay Homo_sapiens 0 579

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