C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbonic anhydrase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159416 Car7-003 ENSMUSG00000031883 10090 + 8:104534700-104550343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159416
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159416 0.353±0.07 0.433±0.11 0.300±0.00 0.344±0.03 0.142±0.00 0.401±0.00 0.332±0.19 0.129±0.02 0.167±0.06 0.408±0.04 0.131±0.08 0.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0003LY CIL_0003LY_0003 CGP 8:104511028-104550343
CIL_0004GC CIL_0004GC_0002 CGP 8:104534700-104596836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004089 IMP carbonate dehydratase activity
GO:0005829 IDA cytosol
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding
GO:0032230 IGI positive regulation of synaptic transmission, GABAergic
GO:0032849 IMP positive regulation of cellular pH reduction
GO:2001225 IMP regulation of chloride transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338437 CA7-001 protein_coding Homo_sapiens 0 1467
ENST00000394069 CA7-002 protein_coding Homo_sapiens 0 1467
ENST00000548332 CA7-003 nonsense_mediated_decay Homo_sapiens 0 708

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