C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161465 Setbp1-201 ENSMUSG00000024548 10090 - 18:78750380-79109391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161465 2.523±2.01 0.727±0.10 4.477±0.44 7.544±3.39 1.089±0.17 2.074±0.26 1.187±0.38 1.668±0.32 0.113±0.04 3.017±0.20 1.022±0.28 1.858±0.36 0.571±0.25 0.290±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CF CIL_0008CF_0002 VISTA 18:78154573-78756222
CIL_0008CG CIL_0008CG_0002 VISTA 18:78747866-79351718

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 ISO:IPI nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143276 setbp1-001 protein_coding Danio_rerio 1.00053e-42 180
ENST00000282030 SETBP1-001 protein_coding Homo_sapiens 0 5385
ENST00000426838 SETBP1-002 protein_coding Homo_sapiens 0 501
ENST00000591940 SETBP1-003 protein_coding Homo_sapiens 0 335

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