C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: argininosuccinate lyase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161640 Asl-008 ENSMUSG00000025533 10090 - 5:130013447-130024300 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverLungMuscleOvaryPlacentaENSMUST00000161640
Transcript ID Adrenal Brain Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000161640 32.411±4.15 4.989±0.00 5.921±1.40 10.414±0.96 99.113±22.27 4.509±0.62 1.075±0.00 14.009±4.14 14.403±6.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050S CIL_00050S_0002 CGP 5:130011258-130060789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004056 IEA argininosuccinate lyase activity
GO:0006520 IMP cellular amino acid metabolic process
GO:0007626 IMP locomotory behavior
GO:0009791 IMP post-embryonic development
GO:0019676 IMP ammonia assimilation cycle
GO:0042450 IEA arginine biosynthetic process via ornithine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304874 ASL-001 protein_coding Homo_sapiens 0 920
ENST00000362000 ASL-007 protein_coding Homo_sapiens 0 671
ENST00000380839 ASL-004 protein_coding Homo_sapiens 0 254
ENST00000395331 ASL-006 protein_coding Homo_sapiens 0 920
ENST00000395332 ASL-005 protein_coding Homo_sapiens 0 920
ENST00000493708 ASL-009 retained_intron Homo_sapiens 1.96182e-44 183

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