C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 3687
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161710 Gm3687-001 ENSMUSG00000090138 10090 + 5:63694190-63694510 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungENSMUST00000161710
Transcript ID Brain Lung
ENSMUST00000161710 0.394±0.00 0.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FE CIL_0002FE_0002 CGP 5:62813823-63810546

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304834 HN1-003 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000356033 HN1-004 protein_coding Homo_sapiens 0 220
ENST00000409753 HN1-001 protein_coding Homo_sapiens 0 272
ENST00000470924 HN1-012 protein_coding Homo_sapiens 0 272
ENST00000476258 HN1-005 protein_coding Homo_sapiens 0 272
ENST00000481647 HN1-010 protein_coding Homo_sapiens 0 272
ENST00000482348 HN1-006 protein_coding Homo_sapiens 0 272
ENST00000580380 HN1-014 protein_coding Homo_sapiens 0 235
ENST00000581874 HN1-013 protein_coding Homo_sapiens 2e-36 156
ENST00000584079 HN1-015 processed_transcript Homo_sapiens 2e-36 156

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