C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipoma HMGIC fusion partner-like protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162280 Lhfpl4-001 ENSMUSG00000042873 10090 - 6:113168090-113195384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162280 0.193±0.06 2.514±0.58 0.087±0.05 25.844±4.55 0.292±0.05 0.442±0.07 0.131±0.04 0.063±0.02 0.022±0.03 0.548±0.08 0.217±0.03 0.431±0.12 0.022±0.00 0.228±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W7 CIL_0002W7_0002 CGP 6:113077365-113195384
CIL_0002W1 CIL_0002W1_0002 CGP 6:113168090-113281387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000108946 lhfpl4a-201 protein_coding Danio_rerio 0 446
ENSDART00000151685 lhfpl4a-001 protein_coding Danio_rerio 0 446
ENSDART00000148785 lhfpl5a-001 protein_coding Danio_rerio 0 213
ENSDART00000066189 lhfpl5a-201 protein_coding Danio_rerio 0 202
ENST00000287585 LHFPL4-001 protein_coding Homo_sapiens 0 1262
ENST00000401970 LHFPL3-002 protein_coding Homo_sapiens 0 344
ENST00000424859 LHFPL3-001 protein_coding Homo_sapiens 0 340
ENST00000498277 LHFPL4-004 processed_transcript Homo_sapiens 0 339

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