C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pannexin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162424 Panx2-001 ENSMUSG00000058441 10090 + 15:89059747-89070907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162424
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162424 0.097±0.05 0.337±0.14 0.420±0.07 4.908±0.62 0.209±0.04 0.078±0.03 0.483±0.34 0.068±0.03 0.013±0.01 0.136±0.02 0.030±0.00 0.213±0.08 0.054±0.01 0.724±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000092 CIL_000092_0002 CGP 15:88982909-89073567
CIL_0000GZ CIL_0000GZ_0002 CGP 15:89059734-89087077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002931 IGI response to ischemia
GO:0005737 IDA cytoplasm
GO:0005886 IC plasma membrane
GO:0005921 IEA gap junction
GO:0006811 IEA ion transport
GO:0015267 IGI channel activity
GO:0016021 IEA integral component of membrane
GO:0034214 ISS protein hexamerization
GO:0055077 ISS gap junction hemi-channel activity
GO:0055085 IGI transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000159647 PANX2-001 protein_coding Homo_sapiens 0 2254
ENST00000395842 PANX2-002 protein_coding Homo_sapiens 0 2388
ENST00000402472 PANX2-003 nonsense_mediated_decay Homo_sapiens 0 1886

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