C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165971 Sept10-201 ENSMUSG00000019917 10090 - 10:59164113-59221847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165971
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165971 7.716±1.78 3.817±0.43 10.482±1.01 2.253±0.33 4.291±1.81 1.753±0.30 2.936±0.23 2.456±0.49 2.742±1.47 4.338±0.37 1.637±0.12 6.288±6.55 5.045±1.47 16.657±1.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079N CIL_00079N_0002 CGP 10:58813359-59221847
CIL_0008QA CIL_0008QA_0002 VISTA 10:59142760-59744333
CIL_0004IM CIL_0004IM_0003 CGP 10:59164113-59226434

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process
GO:0031105 IEA septin complex
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356688 SEPT10-002 protein_coding Homo_sapiens 0 1362
ENST00000388975 SEPT14-001 protein_coding Homo_sapiens 0 675
ENST00000397712 SEPT10-001 protein_coding Homo_sapiens 0 1415
ENST00000397714 SEPT10-006 protein_coding Homo_sapiens 0 1415
ENST00000415095 SEPT10-004 protein_coding Homo_sapiens 0 1362
ENST00000437928 SEPT10-003 protein_coding Homo_sapiens 0 1362
ENST00000442280 RP11-32D17.4-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000461295 SEPT10-013 protein_coding Homo_sapiens 0 551
ENST00000477628 SEPT14-002 processed_transcript Homo_sapiens 0 206

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