C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Willebrand factor A domain containing 3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168600 Vwa3a-003 ENSMUSG00000030889 10090 + 7:120739557-120790245 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverMusclePlacentaTestisENSMUST00000168600
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Placenta Testis
ENSMUST00000168600 0.753±0.00 0.065±0.00 0.048±0.00 0.321±0.00 0.041±0.00 0.397±0.01 0.085±0.04 0.014±0.00 0.068±0.02 0.027±0.02 14.139±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003F2 CIL_0003F2_0002 CGP 7:120677620-120805742

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299840 VWA3A-004 nonsense_mediated_decay Homo_sapiens 0 691
ENST00000389398 VWA3A-001 protein_coding Homo_sapiens 0 1456
ENST00000563389 VWA3A-010 protein_coding Homo_sapiens 0 320
ENST00000566668 VWA3A-007 retained_intron Homo_sapiens 0 608
ENST00000568328 VWA3A-006 protein_coding Homo_sapiens 0 1059

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