C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DIS3 mitotic control homolog (S. cerevisiae)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168844 Dis3l-201 ENSMUSG00000032396 10090 - 9:64306756-64341257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168844
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168844 3.517±0.18 7.246±0.56 2.204±0.10 1.692±0.50 3.266±1.29 3.558±0.82 3.280±0.90 3.170±1.41 2.349±0.86 5.038±0.86 5.716±2.55 2.459±1.55 7.155±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q7 CIL_0008Q7_0002 VISTA 9:63744784-64346949
CIL_0004FF CIL_0004FF_0002 CGP 9:64281607-64341288

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000175 ISS 3'-5'-exoribonuclease activity
GO:0000177 ISS cytoplasmic exosome (RNase complex)
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0016075 IEA rRNA catabolic process
GO:0019899 IEA enzyme binding
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319194 DIS3L-001 protein_coding Homo_sapiens 0 3288
ENST00000319212 DIS3L-004 protein_coding Homo_sapiens 0 3489
ENST00000524795 DIS3L-002 nonsense_mediated_decay Homo_sapiens 0 769
ENST00000525109 DIS3L-009 protein_coding Homo_sapiens 0 628
ENST00000525134 DIS3L-005 protein_coding Homo_sapiens 0 287
ENST00000530537 DIS3L-003 nonsense_mediated_decay Homo_sapiens 0 3046
ENST00000530615 DIS3L-007 protein_coding Homo_sapiens 0 451
ENST00000532293 DIS3L-008 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000532580 DIS3L-006 protein_coding Homo_sapiens 0 466
ENST00000562314 DIS3L-014 retained_intron Homo_sapiens 0 518
ENST00000564909 DIS3L-012 retained_intron Homo_sapiens 0 2514
ENST00000565281 DIS3L-011 retained_intron Homo_sapiens 0 1339

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