C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase, AMP-activated, gamma 1 non-catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168846 Prkag1-201 ENSMUSG00000067713 10090 - 15:98812798-98831508 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168846
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168846 31.647±6.40 35.783±2.83 41.319±2.58 26.841±5.53 32.669±11.36 27.348±2.87 36.743±4.42 28.720±1.59 41.398±27.09 31.661±0.54 25.578±4.32 30.273±7.09 33.378±13.22 7.526±2.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000E CIL_00000E_0002 CGP 15:98803782-98831508
CIL_00000J CIL_00000J_0002 CGP 15:98812798-98871204

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004679 TAS AMP-activated protein kinase activity
GO:0005515 IEA protein binding
GO:0005524 ISS ATP binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0006468 IEA protein phosphorylation
GO:0006633 IEA fatty acid biosynthetic process
GO:0010628 IEA positive regulation of gene expression
GO:0016020 IEA membrane
GO:0016208 ISS AMP binding
GO:0019901 IEA protein kinase binding
GO:0031588 ISS AMP-activated protein kinase complex
GO:0043234 IEA protein complex
GO:0043531 ISS ADP binding
GO:0050790 IEA regulation of catalytic activity
GO:0051291 IEA protein heterooligomerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316299 PRKAG1-002 protein_coding Homo_sapiens 0 1055
ENST00000546531 PRKAG1-008 nonsense_mediated_decay Homo_sapiens 0 1026
ENST00000547082 PRKAG1-009 protein_coding Homo_sapiens 0 311
ENST00000547125 PRKAG1-018 protein_coding Homo_sapiens 1e-23 113
ENST00000547306 PRKAG1-006 protein_coding Homo_sapiens 0 1014
ENST00000548065 PRKAG1-001 protein_coding Homo_sapiens 0 1205
ENST00000548362 PRKAG1-016 protein_coding Homo_sapiens 0 303
ENST00000548605 PRKAG1-014 protein_coding Homo_sapiens 2e-33 147
ENST00000548857 PRKAG1-012 protein_coding Homo_sapiens 0 327
ENST00000548950 PRKAG1-020 protein_coding Homo_sapiens 0 595
ENST00000549726 PRKAG1-004 retained_intron Homo_sapiens 0 427
ENST00000550125 PRKAG1-013 retained_intron Homo_sapiens 0 525
ENST00000550448 PRKAG1-003 retained_intron Homo_sapiens 0 427
ENST00000551121 PRKAG1-019 protein_coding Homo_sapiens 0 621
ENST00000551770 PRKAG1-017 protein_coding Homo_sapiens 0 381
ENST00000552212 PRKAG1-005 protein_coding Homo_sapiens 0 1171
ENST00000552463 PRKAG1-010 protein_coding Homo_sapiens 0 516
ENST00000552793 PRKAG1-015 retained_intron Homo_sapiens 0 617

Loading