C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ninein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169074 Nin-202 ENSMUSG00000021068 10090 - 12:70018760-70111920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000169074
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000169074 0.647±0.00 0.502±0.09 1.082±0.00 1.895±0.00 1.013±0.28 0.412±0.14 0.263±0.01 0.823±0.41 1.030±0.03 3.128±2.60 5.711±5.94 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069L CIL_00069L_0003 CGP 12:69965012-70111925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 ISO spindle pole
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005813 ISS centrosome
GO:0005814 IDA centriole
GO:0005874 IEA microtubule
GO:0019900 IPI kinase binding
GO:0034454 IMP microtubule anchoring at centrosome
GO:0090222 IMP centrosome-templated microtubule nucleation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245441 NIN-201 protein_coding Homo_sapiens 0 2891
ENST00000324330 NIN-202 protein_coding Homo_sapiens 0 2250
ENST00000382041 NIN-016 protein_coding Homo_sapiens 0 2891
ENST00000382043 NIN-010 protein_coding Homo_sapiens 0 2250
ENST00000389869 NIN-019 protein_coding Homo_sapiens 0 2154
ENST00000453196 NIN-203 protein_coding Homo_sapiens 0 2891
ENST00000453401 NIN-008 protein_coding Homo_sapiens 0 1395
ENST00000463419 NIN-011 retained_intron Homo_sapiens 0 340
ENST00000476352 NIN-003 nonsense_mediated_decay Homo_sapiens 0 2891
ENST00000485005 NIN-009 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000486200 NIN-013 processed_transcript Homo_sapiens 6e-37 158
ENST00000486950 NIN-012 protein_coding Homo_sapiens 0 335
ENST00000496749 NIN-004 protein_coding Homo_sapiens 0 390
ENST00000530853 NIN-018 protein_coding Homo_sapiens 0 2584
ENST00000530997 NIN-017 protein_coding Homo_sapiens 0 2856

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