C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20390
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170303 Gm20390-001 ENSMUSG00000091228 10090 - 11:93949819-93968293 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000170303
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000170303 31.063±1.29 35.874±2.77 28.247±0.22 32.949±7.59 30.359±3.46 53.483±10.24 57.172±33.87 15.686±0.00 56.499±1.85 95.117±44.12 11.459±3.54

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 ISS ruffle
GO:0004550 IEA nucleoside diphosphate kinase activity
GO:0004673 IEA protein histidine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006165 IEA nucleoside diphosphate phosphorylation
GO:0006183 IEA GTP biosynthetic process
GO:0006228 IEA UTP biosynthetic process
GO:0006241 IEA CTP biosynthetic process
GO:0007229 ISS integrin-mediated signaling pathway
GO:0018106 IEA peptidyl-histidine phosphorylation
GO:0030027 ISS lamellipodium
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0071944 ISS cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111744 nme2b.2-204 protein_coding Danio_rerio 0 281
ENSDART00000079717 nme2b.2-201 protein_coding Danio_rerio 0 254
ENST00000376392 NME2-003 protein_coding Homo_sapiens 0 749
ENST00000393183 NME1-NME2-201 protein_coding Homo_sapiens 0 333
ENST00000393190 NME1-NME2-005 protein_coding Homo_sapiens 0 628
ENST00000393193 NME2-001 protein_coding Homo_sapiens 0 1050
ENST00000426182 NME2P1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000449172 RP11-92C4.4-001 processed_pseudogene Homo_sapiens 0 220
ENST00000485076 NME1-NME2-006 retained_intron Homo_sapiens 0 189
ENST00000503064 NME1-NME2-002 protein_coding Homo_sapiens 0 628
ENST00000512737 NME1-NME2-001 protein_coding Homo_sapiens 0 623
ENST00000513177 NME1-NME2-004 protein_coding Homo_sapiens 0 625
ENST00000514264 NME1-NME2-003 protein_coding Homo_sapiens 0 627
ENST00000555572 NME2-002 protein_coding Homo_sapiens 0 1024
ENST00000570801 NME1-NME2-008 retained_intron Homo_sapiens 0 427
ENST00000573262 NME1-NME2-009 retained_intron Homo_sapiens 0 283

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