C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialic acid binding Ig-like lectin 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170760 Siglec15-001 ENSMUSG00000091055 10090 - 18:78043614-78057395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000170760
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000170760 0.103±0.05 0.029±0.01 0.061±0.00 0.134±0.07 0.028±0.00 0.128±0.02 0.069±0.04 0.037±0.02 10.258±3.40 0.044±0.02 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093J CIL_00093J_0002 VISTA 18:77936924-78539279
CIL_0007VD CIL_0007VD_0002 VISTA 18:77966847-78568995
CIL_0008FC CIL_0008FC_0002 VISTA 18:78035782-78636542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0032956 IMP regulation of actin cytoskeleton organization
GO:0043234 IDA protein complex
GO:0045124 IMP regulation of bone resorption
GO:0071402 IDA cellular response to lipoprotein particle stimulus
GO:2001204 IGI regulation of osteoclast development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389474 SIGLEC15-001 protein_coding Homo_sapiens 0 994
ENST00000546268 SIGLEC15-002 protein_coding Homo_sapiens 0 924
ENST00000587418 SIGLEC15-004 protein_coding Homo_sapiens 0 390
ENST00000593178 SIGLEC15-003 retained_intron Homo_sapiens 0 444
ENST00000602118 SIGLEC15-006 processed_transcript Homo_sapiens 0 435

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