C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4833427G06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170947 4833427G06Rik-201 ENSMUSG00000032057 10090 - 9:51081313-51102078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000170947
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000170947 0.246±0.06 0.025±0.00 0.201±0.07 0.097±0.00 0.091±0.03 0.064±0.00 0.053±0.03 1.294±0.42 2.333±1.00 0.039±0.02 25.784±5.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003W9 CIL_0003W9_0002 CGP 9:51056780-51102078
CIL_0003WA CIL_0003WA_0002 CGP 9:51081313-51119700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332814 C11orf88-004 protein_coding Homo_sapiens 8.00141e-43 178
ENST00000375618 C11orf88-001 protein_coding Homo_sapiens 0 320
ENST00000529167 C11orf88-002 protein_coding Homo_sapiens 3e-27 128
ENST00000529661 C11orf88-003 nonsense_mediated_decay Homo_sapiens 2.00386e-43 180

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