C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 196, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171394 Fam196a-201 ENSMUSG00000073805 10090 - 7:134881926-134938430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171394
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171394 0.096±0.05 0.558±0.32 0.084±0.00 1.383±0.21 0.124±0.04 0.055±0.05 0.042±0.01 0.098±0.03 0.026±0.02 0.157±0.05 0.010±0.00 0.462±0.21 0.072±0.06 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047A CIL_00047A_0003 CGP 7:134266262-135173639
CIL_00047B CIL_00047B_0003 CGP 7:134670687-135173639
CIL_0001LL CIL_0001LL_0002 CGP 7:134881926-135272942

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000424811 FAM196A-002 protein_coding Homo_sapiens 0 835
ENST00000522781 FAM196A-001 protein_coding Homo_sapiens 0 1799
ENST00000614311 FAM196A-201 protein_coding Homo_sapiens 0 835

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