C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: expressed sequence AU019823
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171462 AU019823-201 ENSMUSG00000059820 10090 - 9:50605244-50617464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverPlacentaENSMUST00000171462
Transcript ID Breast Kidney Liver Placenta
ENSMUST00000171462 4.270±0.00 3.211±0.08 1.644±0.00 1.321±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RG CIL_0000RG_0002 CGP 9:50596338-50605320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280352 C11orf57-001 protein_coding Homo_sapiens 0 946
ENST00000393047 C11orf57-002 protein_coding Homo_sapiens 0 965
ENST00000420986 C11orf57-005 protein_coding Homo_sapiens 0 904
ENST00000524989 C11orf57-006 nonsense_mediated_decay Homo_sapiens 0 922
ENST00000525785 C11orf57-007 protein_coding Homo_sapiens 0 706
ENST00000526879 C11orf57-009 protein_coding Homo_sapiens 0 409
ENST00000530104 C11orf57-004 retained_intron Homo_sapiens 0 375
ENST00000531378 C11orf57-008 protein_coding Homo_sapiens 0 377
ENST00000532163 C11orf57-003 protein_coding Homo_sapiens 0 817

Loading