C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleosome assembly protein 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171797 Nap1l1-202 ENSMUSG00000058799 10090 + 10:111480617-111498142 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171797
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171797 2.498±0.25 2.237±0.00 8.809±0.09 18.859±9.09 1.011±0.00 1.847±1.44 1.828±0.06 3.681±0.49 16.478±13.21 4.442±0.81 7.795±0.43 1.617±1.01 8.542±4.46 3.465±1.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261182 NAP1L1-201 protein_coding Homo_sapiens 0 1770
ENST00000393263 NAP1L1-010 protein_coding Homo_sapiens 0 1770
ENST00000414182 NAP1L1P2-001 processed_pseudogene Homo_sapiens 0 599
ENST00000431879 NAP1L1-004 protein_coding Homo_sapiens 0 1275
ENST00000432820 NAP1L4P3-001 processed_pseudogene Homo_sapiens 0 1415
ENST00000462291 NAP1L1P3-001 processed_pseudogene Homo_sapiens 0 1057
ENST00000524793 NAP1L1P1-001 processed_pseudogene Homo_sapiens 0 1308
ENST00000535020 NAP1L1-012 protein_coding Homo_sapiens 0 1620
ENST00000542344 NAP1L1-007 protein_coding Homo_sapiens 0 1727
ENST00000544816 NAP1L1-006 protein_coding Homo_sapiens 0 1570
ENST00000547479 NAP1L1-018 protein_coding Homo_sapiens 0 364
ENST00000547529 NAP1L1-014 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000547704 NAP1L1-022 protein_coding Homo_sapiens 0 841
ENST00000547773 NAP1L1-009 protein_coding Homo_sapiens 0 1578
ENST00000547993 NAP1L1-015 retained_intron Homo_sapiens 0 963
ENST00000548044 NAP1L1-008 protein_coding Homo_sapiens 0 1567
ENST00000548273 NAP1L1-016 protein_coding Homo_sapiens 0 957
ENST00000549479 NAP1L1-017 retained_intron Homo_sapiens 0 191
ENST00000549596 NAP1L1-005 protein_coding Homo_sapiens 0 1620
ENST00000549988 NAP1L1-019 retained_intron Homo_sapiens 0 300
ENST00000550917 RP11-278C7.1-001 processed_pseudogene Homo_sapiens 0 1147
ENST00000550934 NAP1L1-020 protein_coding Homo_sapiens 0 566
ENST00000551524 NAP1L1-027 protein_coding Homo_sapiens 0 534
ENST00000551600 NAP1L1-021 protein_coding Homo_sapiens 0 566
ENST00000551992 NAP1L1-024 protein_coding Homo_sapiens 0 1208
ENST00000552013 NAP1L1-026 retained_intron Homo_sapiens 3e-36 156
ENST00000552056 NAP1L1-013 protein_coding Homo_sapiens 0 1709
ENST00000552147 NAP1L1-025 nonsense_mediated_decay Homo_sapiens 0 856
ENST00000552342 NAP1L1-011 protein_coding Homo_sapiens 0 961
ENST00000554165 CCDC88C-007 processed_transcript Homo_sapiens 0 191
ENST00000618691 NAP1L1-001 protein_coding Homo_sapiens 0 1932

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