C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: androglobin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172530 Adgb-004 ENSMUSG00000050994 10090 - 10:10335709-10472326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000172530
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000172530 0.098±0.00 0.051±0.00 0.062±0.00 0.085±0.03 0.019±0.01 0.029±0.00 0.118±0.12 0.017±0.00 1.156±0.83 0.004±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J4 CIL_0004J4_0002 CGP 10:9755547-10472326
CIL_00050P CIL_00050P_0002 CGP 10:10335703-10558233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005506 IEA iron ion binding
GO:0005737 IBA cytoplasm
GO:0006508 IBA proteolysis
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326929 ADGB-006 retained_intron Homo_sapiens 0 819
ENST00000367490 ADGB-002 protein_coding Homo_sapiens 0 521
ENST00000397944 ADGB-009 protein_coding Homo_sapiens 0 2032
ENST00000480328 ADGB-001 nonsense_mediated_decay Homo_sapiens 0 1286
ENST00000493950 ADGB-007 nonsense_mediated_decay Homo_sapiens 0 1218

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