C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172939 Ttc6-001 ENSMUSG00000046782 10090 + 12:57575817-57737928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172939
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172939 0.008±0.00 7.024±1.65 0.247±0.09 0.822±0.34 0.255±0.07 0.017±0.01 0.026±0.02 0.082±0.06 0.375±0.15 0.015±0.00 0.030±0.01 0.017±0.01 4.185±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092Q CIL_00092Q_0002 VISTA 12:56991377-57592384

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267368 TTC6-201 protein_coding Homo_sapiens 0 1094
ENST00000382320 TTC6-202 protein_coding Homo_sapiens 0 1688
ENST00000476979 TTC6-002 protein_coding Homo_sapiens 0 1103
ENST00000478811 TTC6-003 nonsense_mediated_decay Homo_sapiens 0 1406
ENST00000553443 TTC6-001 protein_coding Homo_sapiens 0 2597
ENST00000554555 TTC6-004 processed_transcript Homo_sapiens 8.99998e-41 171

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