C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 19684
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173128 Gm19684-001 ENSMUSG00000092277 10090 + 17:36121678-36129692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartMuscleTestisENSMUST00000173128
Transcript ID Adrenal Colon Heart Muscle Testis
ENSMUST00000173128 0.694±0.00 0.957±0.12 0.175±0.01 0.122±0.06 0.039±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359635 HLA-B-001 protein_coding Homo_sapiens 1e-24 119
ENST00000418147 HLA-B-006 protein_coding Homo_sapiens 3e-24 117
ENST00000421349 HLA-B-001 protein_coding Homo_sapiens 6e-27 126
ENST00000425798 HLA-B-006 protein_coding Homo_sapiens 2e-21 108
ENST00000430299 HLA-B-003 protein_coding Homo_sapiens 7e-24 115
ENST00000435618 HLA-B-001 protein_coding Homo_sapiens 1e-23 115
ENST00000436729 HLA-B-006 protein_coding Homo_sapiens 3e-23 113
ENST00000437265 HLA-B-006 protein_coding Homo_sapiens 2e-26 124
ENST00000437866 HLA-B-003 protein_coding Homo_sapiens 3e-22 110
ENST00000445610 HLA-B-003 protein_coding Homo_sapiens 3e-27 126
ENST00000450871 HLA-B-001 protein_coding Homo_sapiens 6e-22 110
ENST00000463832 HLA-B-002 retained_intron Homo_sapiens 9e-29 132
ENST00000466304 HLA-B-003 retained_intron Homo_sapiens 5e-25 119
ENST00000469883 HLA-B-002 retained_intron Homo_sapiens 9e-24 115
ENST00000471639 HLA-B-004 nonsense_mediated_decay Homo_sapiens 4e-22 110
ENST00000479203 HLA-B-004 nonsense_mediated_decay Homo_sapiens 6e-25 119
ENST00000481283 HLA-B-004 nonsense_mediated_decay Homo_sapiens 8e-24 115
ENST00000489762 HLA-B-002 retained_intron Homo_sapiens 2e-25 121
ENST00000493512 HLA-B-002 retained_intron Homo_sapiens 1e-26 124
ENST00000498484 HLA-B-004 nonsense_mediated_decay Homo_sapiens 4e-27 126

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