C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine and histidine rich 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176274 Cyhr1-003 ENSMUSG00000053929 10090 - 15:76646927-76656920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176274 13.326±0.20 19.011±2.80 13.405±1.53 24.068±6.63 15.557±0.35 19.703±5.26 14.598±0.12 18.220±5.56 9.326±2.97 15.615±2.67 18.157±1.09 25.999±7.59 9.122±2.51 26.812±12.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00026P CIL_00026P_0002 CGP 15:76622088-76660117
CIL_0005WV CIL_0005WV_0002 CGP 15:76643395-76668196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086659 cyhr1-001 protein_coding Danio_rerio 0 453
ENST00000438911 CYHR1-001 protein_coding Homo_sapiens 0 658
ENST00000526887 CYHR1-011 protein_coding Homo_sapiens 0 660
ENST00000528558 CYHR1-014 retained_intron Homo_sapiens 0 841
ENST00000528663 CYHR1-007 retained_intron Homo_sapiens 0 662
ENST00000530374 CYHR1-002 protein_coding Homo_sapiens 0 1269
ENST00000533173 CYHR1-006 retained_intron Homo_sapiens 0 662

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