C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine and histidine rich 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177359 Cyhr1-002 ENSMUSG00000053929 10090 - 15:76658140-76660117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000177359
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000177359 20.968±4.01 38.760±2.99 16.640±1.80 20.264±1.07 21.293±2.67 29.348±2.19 14.041±4.57 19.597±1.49 30.906±6.17 4.971±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00026P CIL_00026P_0002 CGP 15:76622088-76660117
CIL_0005WV CIL_0005WV_0002 CGP 15:76643395-76668196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306145 CYHR1-003 protein_coding Homo_sapiens 0 577
ENST00000403000 CYHR1-005 protein_coding Homo_sapiens 0 577
ENST00000424149 CYHR1-004 protein_coding Homo_sapiens 0 577
ENST00000533764 CYHR1-012 protein_coding Homo_sapiens 0 414

Loading