C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Jun dimerization protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177587 Jdp2-203 ENSMUSG00000034271 10090 + 12:85599105-85639878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177587 3.835±3.11 2.262±0.69 3.039±0.93 7.687±8.22 1.949±0.92 0.932±0.10 1.234±0.06 0.669±0.00 0.926±0.00 1.611±0.00 1.877±0.56 3.575±2.68 53.950±3.66 0.222±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084S CIL_00084S_0002 VISTA 12:85135374-85736988
CIL_00085H CIL_00085H_0002 VISTA 12:85154385-85756659
CIL_0007PT CIL_0007PT_0002 VISTA 12:85154400-85756289
CIL_0002AD CIL_0002AD_0002 CGP 12:85473890-85639878
CIL_00000N CIL_00000N_0002 CGP 12:85599105-85709087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0031065 IGI positive regulation of histone deacetylation
GO:0043565 IEA sequence-specific DNA binding
GO:0045599 IDA negative regulation of fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267569 JDP2-003 protein_coding Homo_sapiens 0 774
ENST00000419727 JDP2-004 protein_coding Homo_sapiens 0 776
ENST00000435893 JDP2-001 protein_coding Homo_sapiens 0 771
ENST00000437176 JDP2-201 protein_coding Homo_sapiens 0 771
ENST00000558068 JDP2-006 processed_transcript Homo_sapiens 0 300
ENST00000559060 JDP2-002 protein_coding Homo_sapiens 0 575
ENST00000559773 JDP2-005 processed_transcript Homo_sapiens 0 302

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