C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B cell receptor associated protein 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177962 Bcap29-202 ENSMUSG00000020650 10090 - 12:31595354-31634658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177962
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177962 4.535±0.67 10.479±0.10 9.630±7.25 4.390±1.48 0.955±0.45 7.154±0.99 3.238±0.75 4.657±3.54 3.804±0.45 12.413±2.00 4.589±3.93 5.769±2.78 34.737±19.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZV CIL_0008ZV_0002 VISTA 12:31009963-31611477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006886 IEA intracellular protein transport
GO:0006888 IGI ER to Golgi vesicle-mediated transport
GO:0006915 IEA apoptotic process
GO:0016021 IEA integral component of membrane
GO:0070973 IGI protein localization to endoplasmic reticulum exit site

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000005259 BCAP29-001 protein_coding Homo_sapiens 0 682
ENST00000379117 BCAP29-016 protein_coding Homo_sapiens 0 682
ENST00000379119 BCAP29-201 protein_coding Homo_sapiens 0 656
ENST00000421217 BCAP29-006 protein_coding Homo_sapiens 0 422
ENST00000436699 BCAP29-014 protein_coding Homo_sapiens 0 407
ENST00000442065 BCAP29-010 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000445771 BCAP29-013 protein_coding Homo_sapiens 0 656
ENST00000457837 BCAP29-002 protein_coding Homo_sapiens 0 656
ENST00000465919 BCAP29-015 protein_coding Homo_sapiens 0 580
ENST00000466094 BCAP29-004 processed_transcript Homo_sapiens 0 235
ENST00000473124 BCAP29-007 protein_coding Homo_sapiens 0 235
ENST00000479917 BCAP29-005 protein_coding Homo_sapiens 0 542
ENST00000482371 BCAP29-018 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000486326 BCAP29-011 retained_intron Homo_sapiens 0 348
ENST00000490060 BCAP29-012 retained_intron Homo_sapiens 9.99995e-41 169
ENST00000491150 BCAP29-017 protein_coding Homo_sapiens 0 499
ENST00000494086 BCAP29-009 processed_transcript Homo_sapiens 0 542

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