C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosine deaminase, tRNA-specific 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178231 Adat3-202 ENSMUSG00000035370 10090 + 10:80606021-80615783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverOvaryTestisENSMUST00000178231
Transcript ID Adipose Bladder Brain Colon Liver Ovary Testis
ENSMUST00000178231 2.719±0.00 1.208±0.00 1.320±0.60 3.871±0.58 1.251±0.50 2.772±0.87 1.633±0.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008033 IEA tRNA processing
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316097 SCAMP4-001 protein_coding Homo_sapiens 0 627
ENST00000329478 ADAT3-001 protein_coding Homo_sapiens 0 798
ENST00000409472 SCAMP4-003 protein_coding Homo_sapiens 0 294
ENST00000411971 SCAMP4-008 protein_coding Homo_sapiens 0 388
ENST00000414057 SCAMP4-011 protein_coding Homo_sapiens 0 617
ENST00000452128 SCAMP4-010 retained_intron Homo_sapiens 0 422
ENST00000460767 SCAMP4-006 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000489554 SCAMP4-007 processed_transcript Homo_sapiens 0 425
ENST00000588907 SCAMP4-013 protein_coding Homo_sapiens 0 213
ENST00000590266 SCAMP4-009 protein_coding Homo_sapiens 0 195
ENST00000621748 SCAMP4-012 protein_coding Homo_sapiens 0 627

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