C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8546
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178288 Gm8546-201 ENSMUSG00000094463 10090 - 13:89577155-89578413 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178288
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178288 1.095±0.43 0.947±0.27 0.071±0.00 1.101±1.32 0.760±0.21 0.373±0.13 0.407±0.00 0.499±0.06 0.261±0.18 0.388±0.09 0.019±0.00 2.718±0.94 0.041±0.03 0.469±0.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355413 AGK-001 protein_coding Homo_sapiens 0 1448
ENST00000424708 RP1-305B16.3-001 processed_pseudogene Homo_sapiens 0 1203
ENST00000455254 AGKP1-001 processed_pseudogene Homo_sapiens 0 987
ENST00000465241 AGK-008 retained_intron Homo_sapiens 0 669
ENST00000473247 AGK-002 protein_coding Homo_sapiens 0 1430
ENST00000473884 AGK-005 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000494688 AGK-004 nonsense_mediated_decay Homo_sapiens 0 917
ENST00000495028 AGK-007 processed_transcript Homo_sapiens 0 292
ENST00000496273 AGK-010 processed_transcript Homo_sapiens 0 359
ENST00000496784 AGK-006 retained_intron Homo_sapiens 0 292
ENST00000573706 AGK-002 protein_coding Homo_sapiens 0 673
ENST00000573803 AGK-004 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000575872 AGK-001 protein_coding Homo_sapiens 0 673

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