C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: limb region 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179191 Lmbr1-202 ENSMUSG00000010721 10090 - 5:29229814-29378390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENSMUST00000179191
Transcript ID Muscle Placenta
ENSMUST00000179191 0.694±0.00 1.229±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000455 CIL_000455_0002 CGP 5:29195992-29378390
CIL_00025V CIL_00025V_0002 CGP 5:29229814-29453506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0042733 IMP embryonic digit morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353442 LMBR1-001 protein_coding Homo_sapiens 0 1299
ENST00000359422 LMBR1-201 protein_coding Homo_sapiens 0 976
ENST00000414218 LMBR1-010 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000415428 LMBR1-004 protein_coding Homo_sapiens 0 924
ENST00000430278 LMBR1-008 processed_transcript Homo_sapiens 0 276
ENST00000433968 LMBR1-011 processed_transcript Homo_sapiens 0 276
ENST00000434278 LMBR1-009 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000434453 LMBR1-002 nonsense_mediated_decay Homo_sapiens 0 490
ENST00000434503 LMBR1-014 nonsense_mediated_decay Homo_sapiens 0 472
ENST00000444719 LMBR1-013 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000448926 LMBR1-005 nonsense_mediated_decay Homo_sapiens 0 968
ENST00000454132 LMBR1-003 nonsense_mediated_decay Homo_sapiens 0 1291
ENST00000461469 LMBR1-007 processed_transcript Homo_sapiens 0 337
ENST00000461603 LMBR1-015 processed_transcript Homo_sapiens 0 734
ENST00000477983 LMBR1-016 retained_intron Homo_sapiens 0 340
ENST00000485985 LMBR1-012 retained_intron Homo_sapiens 0 324
ENST00000486837 LMBR1-017 retained_intron Homo_sapiens 0 433
ENST00000498034 LMBR1-006 processed_transcript Homo_sapiens 0 243

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