C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenylosuccinate synthetase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180015 Adssl1-202 ENSMUSG00000011148 10090 + 12:112620045-112641339 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonOvaryENSMUST00000180015
Transcript ID Adipose Breast Colon Ovary
ENSMUST00000180015 0.181±0.00 0.624±0.00 0.216±0.00 0.544±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XC CIL_0006XC_0002 CGP 12:112588784-112641354
CIL_00059G CIL_00059G_0003 CGP 12:112620045-112649152

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004019 IDA adenylosuccinate synthase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0006163 IDA purine nucleotide metabolic process
GO:0044208 IEA 'de novo' AMP biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330877 ADSSL1-001 protein_coding Homo_sapiens 0 1153
ENST00000332972 ADSSL1-002 protein_coding Homo_sapiens 0 1153
ENST00000553540 ADSSL1-003 nonsense_mediated_decay Homo_sapiens 0 1138
ENST00000553580 ADSSL1-009 retained_intron Homo_sapiens 0 309
ENST00000554281 ADSSL1-007 retained_intron Homo_sapiens 0 254
ENST00000554657 ADSSL1-012 processed_transcript Homo_sapiens 0 324
ENST00000555486 ADSSL1-005 nonsense_mediated_decay Homo_sapiens 0 872
ENST00000555674 ADSSL1-010 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000555884 ADSSL1-008 retained_intron Homo_sapiens 0 324
ENST00000556623 ADSSL1-011 protein_coding Homo_sapiens 0 248
ENST00000557271 ADSSL1-006 retained_intron Homo_sapiens 0 246
ENST00000557582 ADSSL1-004 retained_intron Homo_sapiens 0 1138

Loading