C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 10a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180088 Tbc1d10a-201 ENSMUSG00000034412 10090 + 11:4186822-4215502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180088 14.271±2.53 14.445±1.02 38.393±12.04 11.656±6.45 15.365±6.53 15.247±3.85 4.278±1.22 34.340±2.69 5.085±0.97 29.060±2.93 1.244±0.47 32.345±12.28 36.351±24.84 14.038±1.98

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005097 IEA Rab GTPase activator activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109094 si:ch211-87l2.1-201 protein_coding Danio_rerio 0 311
ENSDART00000114217 TBC1D10B-201 protein_coding Danio_rerio 0 303
ENSDART00000146996 si:ch211-87l2.1-001 protein_coding Danio_rerio 0 291
ENST00000215790 TBC1D10A-001 protein_coding Homo_sapiens 0 1869
ENST00000330168 RP1-130H16.18-005 nonsense_mediated_decay Homo_sapiens 0 905
ENST00000393906 TBC1D10A-014 protein_coding Homo_sapiens 0 747
ENST00000403362 TBC1D10A-003 protein_coding Homo_sapiens 0 1535
ENST00000403477 TBC1D10A-002 protein_coding Homo_sapiens 0 1738
ENST00000418047 RP1-130H16.18-002 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000433426 TBC1D10A-013 nonsense_mediated_decay Homo_sapiens 0 1122
ENST00000434291 RP1-130H16.18-001 protein_coding Homo_sapiens 0 946
ENST00000434987 RP1-130H16.18-003 nonsense_mediated_decay Homo_sapiens 0 854
ENST00000437122 TBC1D10A-011 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000447976 RP1-130H16.18-004 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000462073 TBC1D10A-004 retained_intron Homo_sapiens 0 638
ENST00000466666 TBC1D10A-015 retained_intron Homo_sapiens 0 481
ENST00000467596 TBC1D10A-009 retained_intron Homo_sapiens 0 1245
ENST00000490449 TBC1D10A-012 processed_transcript Homo_sapiens 0 457

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