C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5801
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182247 Gm5801-001 ENSMUSG00000058581 10090 - 14:56010536-56011315 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182247 0.780±0.11 0.274±0.11 0.301±0.22 0.390±0.27 0.969±0.49 0.291±0.13 0.868±0.44 0.615±0.31 0.377±0.44 0.876±0.36 0.114±0.04 0.688±0.38 0.041±0.03 1.665±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000765 CIL_000765_000I CGP 14:55971428-56020391

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347370 UBE2J2-201 protein_coding Homo_sapiens 0 719
ENST00000349431 UBE2J2-001 protein_coding Homo_sapiens 0 865
ENST00000360466 UBE2J2-011 protein_coding Homo_sapiens 0 865
ENST00000400929 UBE2J2-016 protein_coding Homo_sapiens 0 719
ENST00000400930 UBE2J2-015 protein_coding Homo_sapiens 0 719
ENST00000422076 UBE2J2-014 protein_coding Homo_sapiens 4e-35 152
ENST00000435198 UBE2J2-010 protein_coding Homo_sapiens 0 682
ENST00000450390 UBE2J2-002 nonsense_mediated_decay Homo_sapiens 0 719
ENST00000464036 UBE2J2-007 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000466752 UBE2J2-004 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000467339 UBE2J2-009 processed_transcript Homo_sapiens 0 294
ENST00000471154 UBE2J2-008 retained_intron Homo_sapiens 0 191
ENST00000473215 UBE2J2-003 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000477894 UBE2J2-006 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000491779 UBE2J2-012 processed_transcript Homo_sapiens 0 377
ENST00000502382 UBE2J2-017 protein_coding Homo_sapiens 0 272
ENST00000503294 UBE2J2-018 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000509720 UBE2J2-019 protein_coding Homo_sapiens 0 324

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