C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182328 Psmd8-002 ENSMUSG00000030591 10090 - 7:29174188-29180552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182328
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182328 111.000±7.21 94.892±14.09 70.392±7.31 80.020±43.79 98.150±15.03 78.198±7.88 56.828±1.98 90.764±7.69 77.144±9.26 63.530±8.10 141.657±13.39 79.451±16.68 83.908±30.35 21.281±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005838 IEA proteasome regulatory particle
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000005431 psmd8-001 protein_coding Danio_rerio 0 392
ENSDART00000134348 psmd8-002 processed_transcript Danio_rerio 0 220
ENST00000215071 PSMD8-001 protein_coding Homo_sapiens 0 1088
ENST00000436275 PSMD8P1-001 processed_pseudogene Homo_sapiens 0 809
ENST00000584430 RP11-672L10.5-001 processed_pseudogene Homo_sapiens 0 420
ENST00000590331 PSMD8-009 nonsense_mediated_decay Homo_sapiens 2e-27 126
ENST00000592001 PSMD8-007 retained_intron Homo_sapiens 0 676
ENST00000592035 PSMD8-002 protein_coding Homo_sapiens 0 699
ENST00000592561 PSMD8-004 protein_coding Homo_sapiens 0 850
ENST00000602911 PSMD8-010 protein_coding Homo_sapiens 0 1046
ENST00000620216 PSMD8-201 protein_coding Homo_sapiens 0 1088

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