C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 229
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182827 Zfp229-005 ENSMUSG00000061544 10090 + 17:21730795-21745061 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000182827
Transcript ID Adrenal Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000182827 0.265±0.04 1.943±0.00 0.232±0.05 0.541±0.00 1.459±0.16 4.148±0.00 13.011±2.99 0.858±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_000D CGP 17:21707741-21769342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304239 ZNF420-002 protein_coding Homo_sapiens 2e-18 99
ENST00000337995 ZNF420-001 protein_coding Homo_sapiens 3e-18 99
ENST00000587029 ZNF420-008 protein_coding Homo_sapiens 5e-19 99
ENST00000587082 ZNF420-007 nonsense_mediated_decay Homo_sapiens 5e-19 99
ENST00000589245 ZNF420-005 protein_coding Homo_sapiens 6e-19 99
ENST00000589461 ZNF420-006 nonsense_mediated_decay Homo_sapiens 4e-19 99

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