C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5835
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185806 RP23-278M14.1-001 ENSMUSG00000101795 10090 - 1:143093346-143094606 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000185806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000185806 0.495±0.12 0.501±0.25 1.331±0.11 0.311±0.02 0.424±0.12 0.411±0.30 0.157±0.10 0.144±0.08 0.303±0.42 0.160±0.06 0.048±0.01 0.591±0.50 0.259±0.31 0.146±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307961 RPL4-001 protein_coding Homo_sapiens 0 1315
ENST00000413888 RPL4P5-001 processed_pseudogene Homo_sapiens 0 1190
ENST00000422486 RPL4P4-001 processed_pseudogene Homo_sapiens 0 1273
ENST00000428881 RPL4P3-001 processed_pseudogene Homo_sapiens 0 1098
ENST00000438116 RPL4P6-001 processed_pseudogene Homo_sapiens 0 856
ENST00000447259 RPL4P2-001 processed_pseudogene Homo_sapiens 0 1094
ENST00000496596 RPL4P1-001 processed_pseudogene Homo_sapiens 0 1051
ENST00000561554 RPL4-014 retained_intron Homo_sapiens 0 243
ENST00000561775 RPL4-006 retained_intron Homo_sapiens 0 913
ENST00000563473 RPL4-016 processed_transcript Homo_sapiens 0 348
ENST00000564439 RPL4-011 retained_intron Homo_sapiens 0 577
ENST00000564647 RPL4-015 retained_intron Homo_sapiens 0 730
ENST00000566039 RPL4-007 retained_intron Homo_sapiens 0 881
ENST00000566491 RPL4-008 retained_intron Homo_sapiens 0 243
ENST00000566622 RPL4-013 retained_intron Homo_sapiens 0 713
ENST00000566624 RPL4-009 retained_intron Homo_sapiens 0 575
ENST00000567229 RPL4-005 retained_intron Homo_sapiens 0 448
ENST00000568588 RPL4-020 protein_coding Homo_sapiens 0 1306
ENST00000569438 RPL4-012 protein_coding Homo_sapiens 0 571
ENST00000569696 RPL4-010 protein_coding Homo_sapiens 0 470
ENST00000571381 RPL4P5-001 processed_pseudogene Homo_sapiens 0 1190

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