C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6652
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186414 RP23-184B11.2-001 ENSMUSG00000099858 10090 - 1:153619604-153620673 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186414 0.872±0.46 0.265±0.10 1.096±0.76 0.182±0.01 0.367±0.20 0.368±0.17 0.849±0.24 5.532±0.87 4.976±3.09 0.259±0.04 0.075±0.02 0.288±0.12 0.485±0.21 6.956±3.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267814 SORD-001 protein_coding Homo_sapiens 0 887
ENST00000558556 SORD2P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 859
ENST00000558574 SORD-007 retained_intron Homo_sapiens 1e-37 159
ENST00000558580 SORD-004 protein_coding Homo_sapiens 0 839
ENST00000559230 SORD-003 nonsense_mediated_decay Homo_sapiens 0 697
ENST00000559562 SORD-006 processed_transcript Homo_sapiens 0 231
ENST00000560488 SORD-005 processed_transcript Homo_sapiens 2e-27 126
ENST00000561384 SORD2P-002 processed_transcript Homo_sapiens 0 712
ENST00000562107 SORD2P-003 retained_intron Homo_sapiens 0 237
ENST00000564140 SORD2P-004 processed_transcript Homo_sapiens 0 237

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