C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like family, member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216129 TTLL12-001 ENSG00000100304 9606 - 22:43166622-43187133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216129 10.845±0.00 7.974±0.00 0.403±0.00 4.854±2.81 9.919±0.00 5.484±2.97 2.392±1.93 6.387±3.27 5.142±2.55 2.502±0.94 5.250±4.83 28.074±14.42 11.476±2.94 20.340±2.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0001 VISTA 22:42800321-43401810
CIL_0008W4 CIL_0008W4_0001 VISTA 22:42938962-43540911
CIL_0004LQ CIL_0004LQ_0001 CGP 22:43151514-43187133
CIL_0004UW CIL_0004UW_0001 CGP 22:43166622-43343388

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006464 IEA cellular protein modification process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016901 Ttll12-001 protein_coding Mus_musculus 0 2076
ENSMUST00000136066 Ttll12-002 nonsense_mediated_decay Mus_musculus 0 1818
ENSMUST00000134334 Ttll12-003 retained_intron Mus_musculus 0 405

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